<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:creator>Tompitak M</dc:creator>
  <dc:creator>de Bruin L</dc:creator>
  <dc:creator>Eslami-Mossallam B</dc:creator>
  <dc:creator>Schiessel H</dc:creator>
  <dc:date>2017</dc:date>
  <dc:description xmlns:ns0="xml" ns0:lang="en">About three quarters of our DNA is wrapped into nucleosomes: DNA spools with a protein core. It is well known that the affinity of a given DNA stretch to be incorporated into a nucleosome depends on the geometry and elasticity of the basepair sequence involved, causing the positioning of nucleosomes. Here we show that DNA elasticity can have a much deeper effect on nucleosomes than just their positioning: it affects their "identities". Employing a recently developed computational algorithm, the mutation Monte Carlo method, we design nucleosomes with surprising physical characteristics. Unlike any other nucleosomes studied so far, these nucleosomes are short-lived when put under mechanical tension whereas other physical properties are largely unaffected. This suggests that the nucleosome, the most abundant DNA-protein complex in our cells, might more properly be considered a class of complexes with a wide array of physical properties, and raises the possibility that evolution has shaped various nucleosome species according to their genomic context.</dc:description>
  <dc:format>application/pdf</dc:format>
  <dc:identifier>https://sonar.ch/global/documents/209809</dc:identifier>
  <dc:language>eng</dc:language>
  <dc:relation>info:eu-repo/semantics/altIdentifier/doi/10.1103/PhysRevE.95.052402</dc:relation>
  <dc:relation>info:eu-repo/semantics/altIdentifier/pmid/28618598</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:source>Physical review. E. - 2017</dc:source>
  <dc:subject xmlns:ns1="xml" ns1:lang="en">Biomechanical Phenomena</dc:subject>
  <dc:subject xmlns:ns2="xml" ns2:lang="en">Computer Simulation</dc:subject>
  <dc:subject xmlns:ns3="xml" ns3:lang="en">DNA</dc:subject>
  <dc:subject xmlns:ns4="xml" ns4:lang="en">Elasticity</dc:subject>
  <dc:subject xmlns:ns5="xml" ns5:lang="en">Models, Genetic</dc:subject>
  <dc:subject xmlns:ns6="xml" ns6:lang="en">Models, Molecular</dc:subject>
  <dc:subject xmlns:ns7="xml" ns7:lang="en">Monte Carlo Method</dc:subject>
  <dc:subject xmlns:ns8="xml" ns8:lang="en">Nucleosomes</dc:subject>
  <dc:subject xmlns:ns9="xml" ns9:lang="en">Torsion, Mechanical</dc:subject>
  <dc:title xmlns:ns10="xml" ns10:lang="en">Designing nucleosomal force sensors.</dc:title>
  <dc:type>http://purl.org/coar/resource_type/c_6501</dc:type>
</oai_dc:dc>
