<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:creator>Fish RJ</dc:creator>
  <dc:creator>Neerman-Arbez M</dc:creator>
  <dc:date>2012</dc:date>
  <dc:description xmlns:ns0="xml" ns0:lang="en">High circulating fibrinogen levels correlate with cardiovascular disease (CVD) risk. Fibrinogen levels vary between people and also change in response to physiological and environmental stimuli. A modest proportion of the variation in fibrinogen levels can be explained by genotype, inferring that variation in genomic sequences that regulate the fibrinogen genes ( FGA , FGB and FGG ) may affect hepatic fibrinogen production and perhaps CVD risk. We previously identified a conserved liver enhancer in the fibrinogen gene cluster (CNC12), between FGB and FGA . Genome-wide Chromatin immunoprecipitation-sequencing (ChIP-seq) demonstrated that transcription factors which bind fibrinogen gene promoters also interact with CNC12, as well as two potential fibrinogen enhancers (PFE), between FGA and FGG . Here we show that one of the PFE sequences has potent hepatocyte enhancer activity. Using a luciferase reporter gene system, we found that PFE2 enhances minimal promoter- and FGA promoter-driven gene expression in hepatoma cells, regardless of its orientation with respect to the promoters. A region within PFE2 bears a short series of conserved nucleotides which maintain enhancer activity without flanking sequence. We also demonstrate that PFE2 is a liver enhancer in vivo, driving enhanced green fluorescent protein expression in transgenic zebrafish larval livers. Our study shows that combining public domain ChIP-seq data with in vitro and in vivo functional tests can identify novel fibrinogen gene cluster regulatory sequences. Variation in such elements could affect fibrinogen production and influence CVD risk.</dc:description>
  <dc:identifier>https://sonar.ch/global/documents/62219</dc:identifier>
  <dc:language>eng</dc:language>
  <dc:relation>info:eu-repo/semantics/altIdentifier/doi/10.1160/TH12-04-0274</dc:relation>
  <dc:relation>info:eu-repo/semantics/altIdentifier/pmid/22836734</dc:relation>
  <dc:source>Thrombosis and haemostasis. - 2012</dc:source>
  <dc:subject xmlns:ns1="xml" ns1:lang="en">Animals</dc:subject>
  <dc:subject xmlns:ns2="xml" ns2:lang="en">Animals, Genetically Modified</dc:subject>
  <dc:subject xmlns:ns3="xml" ns3:lang="en">Carcinoma, Hepatocellular</dc:subject>
  <dc:subject xmlns:ns4="xml" ns4:lang="en">Cell Line, Tumor</dc:subject>
  <dc:subject xmlns:ns5="xml" ns5:lang="en">Chromatin Immunoprecipitation</dc:subject>
  <dc:subject xmlns:ns6="xml" ns6:lang="en">Chromosome Mapping</dc:subject>
  <dc:subject xmlns:ns7="xml" ns7:lang="en">Conserved Sequence</dc:subject>
  <dc:subject xmlns:ns8="xml" ns8:lang="en">Enhancer Elements, Genetic</dc:subject>
  <dc:subject xmlns:ns9="xml" ns9:lang="en">Fibrinogen</dc:subject>
  <dc:subject xmlns:ns10="xml" ns10:lang="en">Gene Expression Regulation</dc:subject>
  <dc:subject xmlns:ns11="xml" ns11:lang="en">Genes, Reporter</dc:subject>
  <dc:subject xmlns:ns12="xml" ns12:lang="en">Genes, Synthetic</dc:subject>
  <dc:subject xmlns:ns13="xml" ns13:lang="en">Green Fluorescent Proteins</dc:subject>
  <dc:subject xmlns:ns14="xml" ns14:lang="en">HEK293 Cells</dc:subject>
  <dc:subject xmlns:ns15="xml" ns15:lang="en">Hep G2 Cells</dc:subject>
  <dc:subject xmlns:ns16="xml" ns16:lang="en">Hepatocytes</dc:subject>
  <dc:subject xmlns:ns17="xml" ns17:lang="en">Humans</dc:subject>
  <dc:subject xmlns:ns18="xml" ns18:lang="en">Larva</dc:subject>
  <dc:subject xmlns:ns19="xml" ns19:lang="en">Liver Neoplasms</dc:subject>
  <dc:subject xmlns:ns20="xml" ns20:lang="en">Luciferases</dc:subject>
  <dc:subject xmlns:ns21="xml" ns21:lang="en">Mice</dc:subject>
  <dc:subject xmlns:ns22="xml" ns22:lang="en">Recombinant Fusion Proteins</dc:subject>
  <dc:subject xmlns:ns23="xml" ns23:lang="en">Transgenes</dc:subject>
  <dc:subject xmlns:ns24="xml" ns24:lang="en">Zebrafish</dc:subject>
  <dc:title xmlns:ns25="xml" ns25:lang="en">A novel regulatory element between the human FGA and FGG genes.</dc:title>
  <dc:type>http://purl.org/coar/resource_type/c_6501</dc:type>
</oai_dc:dc>
