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Family-Free Genome Comparison.
Journal article

Family-Free Genome Comparison.

  • Doerr D School of Computer and Communication Sciences, EPFL, Lausanne, Switzerland.
  • Feijão P Faculty of Technology, Bielefeld University, Bielefeld, Germany.
  • Stoye J Faculty of Technology, Bielefeld University, Bielefeld, Germany. jens.stoye@uni-bielefeld.de.
  • 2017-12-27
Published in:
  • Methods in molecular biology (Clifton, N.J.). - 2018
Common intervals
Conserved adjacencies
Double-cut-and-join
Gene family-free
Gene order analysis
Genome distance
Genome similarity
Computational Biology
Evolution, Molecular
Gene Order
Genome
Models, Genetic
Molecular Sequence Annotation
Phylogeny
Software
English The comparison of genome structures across distinct species offers valuable insights into the species' phylogeny, genome organization, and gene associations. In this chapter, we review the family-free genome comparison tool FFGC which provides several methods for gene order analyses that do not require prior knowledge of evolutionary relationships between the genes across the studied genomes. Moreover, the tool features a complete workflow for genome comparison, requiring nothing but annotated genome sequences as input.
Language
  • English
Open access status
closed
Identifiers
Persistent URL
https://sonar.ch/global/documents/22300
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